tenOever LaboratoryVirology · Host defense · RNA biology
Technologies

Mass spectrometry proteomics

proteomics and biochemistry

Recorded terms: mass spectrometry; mass spectrometry proteomics; quantitative mass spectrometry; quantitative mass spectrometry proteomics

2023 · Journal of Virology · lab-led

Archaeal Kink-Turn Binding Protein Mediates Inhibition of Orthomyxovirus Splicing Biology

Archaeal members of the L30 protein family, but not their orthologues from any other domain of life, block production of the spliced influenza A virus, influenza B virus and isavirus transcripts without measurably disturbing host splicing, identifying a shared and apparently noncanonical feature of orthomyxovirus splicing.

2021 · Nature Biomedical Engineering · collaborative

A human-airway-on-a-chip for the rapid identification of candidate antiviral therapeutics and prophylactics

A microfluidic bronchial airway chip lined with differentiated human airway epithelium and pulmonary endothelium reproduces strain-dependent influenza virulence, cytokine output and neutrophil recruitment, and when drugs are delivered at clinically achievable blood concentrations under flow it separates candidates that work in cell lines from those that also work in hamsters challenged with SARS-CoV-2.

2020 · Cell · collaborative

The Global Phosphorylation Landscape of SARS-CoV-2 Infection

A time-resolved phosphoproteomic survey of SARS-CoV-2-infected cells showing that infection acts mainly through signalling rather than protein abundance, activating casein kinase II and the p38 cascade while shutting down mitotic kinases, and converting that kinase profile into inhibitors with antiviral activity.

2007 · Science · training period

Multiple Functions of the IKK-Related Kinase IKKε in Interferon-Mediated Antiviral Immunity

Mice lacking IKKε produce normal interferon-β but fail to induce roughly a third of interferon-stimulated genes, because interferon activates IKKε, which phosphorylates STAT1 at Ser708 and thereby determines whether ISGF3 occupies a subset of response elements.